Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC104390.1-201ENST00000555663 520 ntBASIC17.55■□□□□ 0.4
RTCAO00442 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.55■□□□□ 0.4
RTCAO00442 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.55■□□□□ 0.4
RTCAO00442 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTCAO00442 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.55■□□□□ 0.4
RTCAO00442 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.55■□□□□ 0.4
RTCAO00442 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RTCAO00442 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTCAO00442 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 AC018470.1-201ENST00000624790 3129 ntBASIC17.54■□□□□ 0.4
RTCAO00442 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.54■□□□□ 0.4
RTCAO00442 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 TERF1P1-201ENST00000311003 1181 ntBASIC17.54■□□□□ 0.4
RTCAO00442 AC005521.1-201ENST00000393351 872 ntBASIC17.54■□□□□ 0.4
RTCAO00442 AL137013.1-201ENST00000432946 1228 ntBASIC17.54■□□□□ 0.4
RTCAO00442 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.54■□□□□ 0.4
RTCAO00442 KRT18P57-201ENST00000443599 1254 ntBASIC17.54■□□□□ 0.4
RTCAO00442 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 SEC1P-202ENST00000473944 940 ntBASIC17.54■□□□□ 0.4
RTCAO00442 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.54■□□□□ 0.4
RTCAO00442 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 AL023973.1-201ENST00000624619 620 ntBASIC17.54■□□□□ 0.4
RTCAO00442 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RTCAO00442 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTCAO00442 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RTCAO00442 SDHAP2-201ENST00000455183 2001 ntBASIC17.54■□□□□ 0.4
RTCAO00442 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RTCAO00442 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTCAO00442 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.53■□□□□ 0.4
RTCAO00442 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.53■□□□□ 0.4
RTCAO00442 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.53■□□□□ 0.4
RTCAO00442 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.53■□□□□ 0.4
RTCAO00442 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.53■□□□□ 0.4
RTCAO00442 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 LINC01023-201ENST00000606054 436 ntBASIC17.53■□□□□ 0.4
RTCAO00442 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.53■□□□□ 0.4
RTCAO00442 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTCAO00442 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.53■□□□□ 0.4
RTCAO00442 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.53■□□□□ 0.4
RTCAO00442 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.53■□□□□ 0.4
RTCAO00442 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 AL390961.4-201ENST00000623958 2535 ntBASIC17.53■□□□□ 0.4
RTCAO00442 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.53■□□□□ 0.4
RTCAO00442 HCG11-201ENST00000411553 5696 ntBASIC17.53■□□□□ 0.4
RTCAO00442 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.53■□□□□ 0.4
RTCAO00442 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTCAO00442 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms