Protein–RNA interactions for Protein: H3BV60

TGFBR3L, Transforming growth factor-beta receptor type 3-like protein, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3LH3BV60 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 GMCL1P1-201ENST00000463439 1581 ntBASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TGFBR3LH3BV60 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TGFBR3LH3BV60 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 AC135776.1-201ENST00000319817 2481 ntBASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TGFBR3LH3BV60 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 AC093677.2-201ENST00000600169 1863 ntBASIC17.08■□□□□ 0.33
TGFBR3LH3BV60 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 IER3-202ENST00000376377 1350 ntBASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 AP000550.4-202ENST00000639755 178 ntBASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TGFBR3LH3BV60 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 PHGDH-209ENST00000641074 1780 ntBASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TGFBR3LH3BV60 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms