Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SMKR1H3BMG3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
SMKR1H3BMG3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 AC231657.2-201ENST00000624556 255 ntBASIC13.45□□□□□ -0.26
SMKR1H3BMG3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 AC112777.1-201ENST00000540175 1423 ntBASIC13.45□□□□□ -0.26
SMKR1H3BMG3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 AC011676.5-201ENST00000624864 2660 ntBASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SMKR1H3BMG3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 NKILA-202ENST00000614771 2598 ntBASIC13.44□□□□□ -0.26
SMKR1H3BMG3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 AC008556.1-201ENST00000610908 2040 ntBASIC13.44□□□□□ -0.26
SMKR1H3BMG3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.44□□□□□ -0.26
SMKR1H3BMG3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 RAP2CP1-201ENST00000605103 478 ntBASIC13.44□□□□□ -0.26
SMKR1H3BMG3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms