Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 CROCCP1-201ENST00000426910 5675 ntBASIC14.94□□□□□ -0.02
LINC00862A6NCI5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00862A6NCI5 AC092068.3-201ENST00000587894 2016 ntBASIC14.93□□□□□ -0.02
LINC00862A6NCI5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 KRT8P33-201ENST00000508125 1423 ntBASIC14.93□□□□□ -0.02
LINC00862A6NCI5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 AC007322.3-201ENST00000426526 701 ntBASIC14.93□□□□□ -0.02
LINC00862A6NCI5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00862A6NCI5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PGM5P4-201ENST00000421970 445 ntBASIC14.92□□□□□ -0.02
LINC00862A6NCI5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 AC126177.1-201ENST00000547829 2218 ntBASIC14.92□□□□□ -0.02
LINC00862A6NCI5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00862A6NCI5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00862A6NCI5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms