Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AL353807.1-201ENST00000427475 662 ntBASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 KRT18P16-201ENST00000510337 1294 ntBASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4B1Q9Y6B7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 OR6D1P-202ENST00000641007 5290 ntBASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 AP001412.1-201ENST00000608405 714 ntBASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4B1Q9Y6B7 AC135776.1-201ENST00000319817 2481 ntBASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms