Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX9Q9Y5X1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 AL162741.1-201ENST00000565563 1558 ntBASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX9Q9Y5X1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SNX9Q9Y5X1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX9Q9Y5X1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX9Q9Y5X1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX9Q9Y5X1 WIZP1-201ENST00000531444 2299 ntBASIC19.64■□□□□ 0.74
SNX9Q9Y5X1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 UPK3BP1-201ENST00000428678 509 ntBASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 AC024563.2-201ENST00000603282 481 ntBASIC19.64■□□□□ 0.73
SNX9Q9Y5X1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms