Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 AP001269.4-201ENST00000609611 512 ntBASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 AC083906.6-201ENST00000641366 219 ntBASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHAC2Q9Y5I4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHAC2Q9Y5I4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHAC2Q9Y5I4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHAC2Q9Y5I4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 PMS2P1-201ENST00000431037 1228 ntBASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 RNPS1P1-201ENST00000507437 918 ntBASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHAC2Q9Y5I4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 AF186996.4-201ENST00000467186 377 ntBASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 AC113404.2-201ENST00000507884 177 ntBASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 AC064862.7-201ENST00000604520 867 ntBASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHAC2Q9Y5I4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 AL355877.3-201ENST00000622820 899 ntBASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 FAM215A-202ENST00000632077 792 ntBASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 LINC01126-201ENST00000623515 1646 ntBASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHAC2Q9Y5I4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHAC2Q9Y5I4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms