Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COPS3Q9UNS2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 AC134043.2-201ENST00000624206 2238 ntBASIC16.43■□□□□ 0.22
COPS3Q9UNS2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.43■□□□□ 0.22
COPS3Q9UNS2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 CR392000.1-201ENST00000624770 1228 ntBASIC16.43■□□□□ 0.22
COPS3Q9UNS2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 KRT16P1-201ENST00000399124 1418 ntBASIC16.43■□□□□ 0.22
COPS3Q9UNS2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COPS3Q9UNS2 AC138028.4-201ENST00000564984 1845 ntBASIC16.42■□□□□ 0.22
COPS3Q9UNS2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 AC139713.2-201ENST00000641328 2723 ntBASIC16.42■□□□□ 0.22
COPS3Q9UNS2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 AC011506.1-201ENST00000474329 610 ntBASIC16.42■□□□□ 0.22
COPS3Q9UNS2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
COPS3Q9UNS2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 AC006058.3-201ENST00000606217 1069 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms