Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC27.77■■■□□ 2.04
COL17A1Q9UMD9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL17A1Q9UMD9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL17A1Q9UMD9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 PRSS29P-201ENST00000440800 595 ntBASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 AC113404.2-201ENST00000507884 177 ntBASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.04
COL17A1Q9UMD9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC27.76■■■□□ 2.03
COL17A1Q9UMD9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 HEIH-201ENST00000623091 1652 ntBASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 AC005034.1-201ENST00000426657 489 ntBASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 AL031432.2-201ENST00000566714 459 ntBASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 AL928711.1-201ENST00000570165 459 ntBASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
COL17A1Q9UMD9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC27.74■■■□□ 2.03
COL17A1Q9UMD9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 CD99-202ENST00000381180 530 ntTSL 2 BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 AC092474.2-201ENST00000424288 719 ntBASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL17A1Q9UMD9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 MIR4745-201ENST00000577608 62 ntBASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 KRT8P50-201ENST00000562022 1438 ntBASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC27.72■■■□□ 2.03
COL17A1Q9UMD9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms