Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 AC106795.1-205ENST00000512851 1056 ntBASIC20.89■□□□□ 0.93
FBXO40Q9UH90 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 AL662844.1-201ENST00000546340 181 ntBASIC20.89■□□□□ 0.93
FBXO40Q9UH90 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.89■□□□□ 0.93
FBXO40Q9UH90 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 TSPY12P-201ENST00000421279 868 ntBASIC20.88■□□□□ 0.93
FBXO40Q9UH90 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 SAPCD2P3-201ENST00000455031 850 ntBASIC20.88■□□□□ 0.93
FBXO40Q9UH90 AP002469.2-201ENST00000531724 424 ntBASIC20.88■□□□□ 0.93
FBXO40Q9UH90 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 REXO1L6P-202ENST00000619970 1078 ntBASIC20.88■□□□□ 0.93
FBXO40Q9UH90 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.88■□□□□ 0.93
FBXO40Q9UH90 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SDHAP2-201ENST00000455183 2001 ntBASIC20.87■□□□□ 0.93
FBXO40Q9UH90 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.87■□□□□ 0.93
FBXO40Q9UH90 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
FBXO40Q9UH90 AC116562.4-201ENST00000641316 2276 ntBASIC20.87■□□□□ 0.93
FBXO40Q9UH90 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FBXO40Q9UH90 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 AKR1C7P-201ENST00000305623 895 ntBASIC20.85■□□□□ 0.93
FBXO40Q9UH90 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.85■□□□□ 0.93
FBXO40Q9UH90 BNIP3P18-201ENST00000593976 575 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms