Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.74■□□□□ 0.59
EBF1Q9UH73 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EBF1Q9UH73 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EBF1Q9UH73 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EBF1Q9UH73 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EBF1Q9UH73 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 GPALPP1-207ENST00000611650 899 ntBASIC18.73■□□□□ 0.59
EBF1Q9UH73 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EBF1Q9UH73 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.73■□□□□ 0.59
EBF1Q9UH73 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 AP003733.1-201ENST00000491725 852 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 AP002469.2-201ENST00000531724 424 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 MIR3180-4-201ENST00000582223 153 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 AL390719.2-201ENST00000606993 987 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 IGHV3-41-201ENST00000613121 348 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 AC005332.7-201ENST00000614046 2005 ntBASIC18.72■□□□□ 0.59
EBF1Q9UH73 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EBF1Q9UH73 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.72■□□□□ 0.59
EBF1Q9UH73 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF1Q9UH73 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.71■□□□□ 0.59
EBF1Q9UH73 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF1Q9UH73 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF1Q9UH73 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EBF1Q9UH73 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EBF1Q9UH73 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 SLC25A6P4-201ENST00000586535 553 ntBASIC18.71■□□□□ 0.59
EBF1Q9UH73 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.71■□□□□ 0.59
EBF1Q9UH73 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms