Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.77■□□□□ 0.6
UBP1Q9NZI7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
UBP1Q9NZI7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
UBP1Q9NZI7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
UBP1Q9NZI7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
UBP1Q9NZI7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AL390961.4-201ENST00000623958 2535 ntBASIC18.76■□□□□ 0.59
UBP1Q9NZI7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC135776.1-201ENST00000319817 2481 ntBASIC18.76■□□□□ 0.59
UBP1Q9NZI7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.76■□□□□ 0.59
UBP1Q9NZI7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC145285.6-201ENST00000604632 637 ntBASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC073912.3-201ENST00000624414 853 ntBASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBP1Q9NZI7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.75■□□□□ 0.59
UBP1Q9NZI7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ESPNP-201ENST00000270691 2015 ntBASIC18.75■□□□□ 0.59
UBP1Q9NZI7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.75■□□□□ 0.59
UBP1Q9NZI7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 AP000593.1-201ENST00000393668 712 ntBASIC18.74■□□□□ 0.59
UBP1Q9NZI7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 AC112497.1-201ENST00000624824 639 ntBASIC18.74■□□□□ 0.59
UBP1Q9NZI7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBP1Q9NZI7 AL354751.1-201ENST00000412768 1863 ntBASIC18.73■□□□□ 0.59
UBP1Q9NZI7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBP1Q9NZI7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms