Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 FEM1AP3-201ENST00000403722 1741 ntBASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 AC073592.3-201ENST00000625118 1834 ntBASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHCHD3Q9NX63 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 AC126763.1-201ENST00000552015 2118 ntBASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 KRT18P61-201ENST00000585825 1298 ntBASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.12■□□□□ 0.33
CHCHD3Q9NX63 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 AL390719.1-204ENST00000412397 1219 ntBASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 AC083906.6-201ENST00000641366 219 ntBASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.11■□□□□ 0.33
CHCHD3Q9NX63 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms