Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC008622.2-201ENST00000617006 1229 ntBASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AL121956.5-201ENST00000625261 221 ntBASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC083906.6-201ENST00000641366 219 ntBASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
DNAJC28Q9NX36 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 AC020916.1-201ENST00000587762 1774 ntBASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 PCED1CP-201ENST00000419887 785 ntBASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 MIR4674-201ENST00000582457 87 ntBASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAJC28Q9NX36 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 ABALON-201ENST00000629058 1903 ntBASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 KRT18P38-201ENST00000449496 1282 ntBASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 FAM86EP-206ENST00000510506 987 ntBASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 NEK4P2-201ENST00000580004 1012 ntBASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DNAJC28Q9NX36 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.66■□□□□ 0.58
DNAJC28Q9NX36 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DNAJC28Q9NX36 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms