Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ZNF304Q9HCX3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF304Q9HCX3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF304Q9HCX3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF304Q9HCX3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF304Q9HCX3 AL391807.1-203ENST00000604392 2365 ntBASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 KRT8P50-201ENST00000562022 1438 ntBASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF304Q9HCX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 AL645929.1-201ENST00000420084 975 ntBASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 HLA-F-220ENST00000434407 884 ntBASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SPDYE13P-201ENST00000445314 798 ntBASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF304Q9HCX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 PVRIG2P-201ENST00000435460 978 ntBASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF304Q9HCX3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms