Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AL354751.1-201ENST00000412768 1863 ntBASIC19.33■□□□□ 0.68
CD248Q9HCU0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 AC092647.4-201ENST00000457211 535 ntBASIC19.32■□□□□ 0.68
CD248Q9HCU0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD248Q9HCU0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 AC124067.4-201ENST00000519691 2379 ntBASIC19.32■□□□□ 0.68
CD248Q9HCU0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CD248Q9HCU0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 AC104417.2-201ENST00000562989 1793 ntBASIC19.31■□□□□ 0.68
CD248Q9HCU0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD248Q9HCU0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CD248Q9HCU0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 AC009947.2-201ENST00000444014 672 ntBASIC19.3■□□□□ 0.68
CD248Q9HCU0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 MIR4674-201ENST00000582457 87 ntBASIC19.3■□□□□ 0.68
CD248Q9HCU0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD248Q9HCU0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.3■□□□□ 0.68
CD248Q9HCU0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD248Q9HCU0 PCED1CP-201ENST00000419887 785 ntBASIC19.29■□□□□ 0.68
CD248Q9HCU0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.29■□□□□ 0.68
CD248Q9HCU0 AL359075.1-203ENST00000462729 1002 ntBASIC19.29■□□□□ 0.68
CD248Q9HCU0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms