Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.35□□□□□ -0.43
SND1-IT1Q9HBX3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 DUSP5P2-201ENST00000426873 1033 ntBASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 AC138028.4-201ENST00000564984 1845 ntBASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.34□□□□□ -0.43
SND1-IT1Q9HBX3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SND1-IT1Q9HBX3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SND1-IT1Q9HBX3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.33□□□□□ -0.43
SND1-IT1Q9HBX3 PCDHA12-202ENST00000613593 2588 ntBASIC12.33□□□□□ -0.43
SND1-IT1Q9HBX3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SND1-IT1Q9HBX3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms