Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRTM1Q9HBL6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 AL355355.2-201ENST00000442321 338 ntBASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 MIR3180-5-201ENST00000583743 153 ntBASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 AC067852.2-201ENST00000590513 2313 ntBASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 REXO1L9P-201ENST00000604264 2108 ntBASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRTM1Q9HBL6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 AC138028.4-201ENST00000564984 1845 ntBASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRTM1Q9HBL6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
LRTM1Q9HBL6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LRTM1Q9HBL6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
LRTM1Q9HBL6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRTM1Q9HBL6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRTM1Q9HBL6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 MIR4674-201ENST00000582457 87 ntBASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 AC026471.5-201ENST00000615068 467 ntBASIC17.7■□□□□ 0.42
LRTM1Q9HBL6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms