Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD4Q9H0A8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 KRASP1-201ENST00000407852 552 ntBASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AC008403.3-201ENST00000598924 454 ntBASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 FZD10-202ENST00000539839 3282 ntBASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 MYLKP1-201ENST00000509077 1580 ntBASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 RCC2P3-201ENST00000418112 1537 ntBASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COMMD4Q9H0A8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD4Q9H0A8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 AC134043.2-201ENST00000624206 2238 ntBASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 AL023875.1-201ENST00000640777 796 ntBASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 AC008556.1-201ENST00000610908 2040 ntBASIC16.27■□□□□ 0.2
COMMD4Q9H0A8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.27■□□□□ 0.19
COMMD4Q9H0A8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms