Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.83■■□□□ 1.08
NBPF3Q9H094 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NBPF3Q9H094 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NBPF3Q9H094 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.08
NBPF3Q9H094 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
NBPF3Q9H094 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NBPF3Q9H094 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NBPF3Q9H094 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 MIR149-201ENST00000384879 89 ntBASIC21.82■■□□□ 1.08
NBPF3Q9H094 AC034232.1-201ENST00000506026 1064 ntBASIC21.82■■□□□ 1.08
NBPF3Q9H094 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 AL391807.1-203ENST00000604392 2365 ntBASIC21.82■■□□□ 1.08
NBPF3Q9H094 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF3Q9H094 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF3Q9H094 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 ATP5G2P1-201ENST00000433580 426 ntBASIC21.81■■□□□ 1.08
NBPF3Q9H094 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NBPF3Q9H094 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF3Q9H094 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 AL024508.2-201ENST00000607749 1894 ntBASIC21.8■■□□□ 1.08
NBPF3Q9H094 AC009102.3-201ENST00000623118 1491 ntBASIC21.8■■□□□ 1.08
NBPF3Q9H094 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 PVRIG2P-201ENST00000435460 978 ntBASIC21.8■■□□□ 1.08
NBPF3Q9H094 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.8■■□□□ 1.08
NBPF3Q9H094 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF3Q9H094 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms