Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AC099343.3-201ENST00000605834 2503 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AC104076.2-201ENST00000448912 469 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 HOMER2P1-201ENST00000455653 964 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 RASA4DP-201ENST00000460726 1199 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AL157888.1-201ENST00000631930 593 ntBASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
POLR1EQ9GZS1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 STARP1-201ENST00000397973 869 ntBASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 BCL2-203ENST00000589955 5011 ntBASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1EQ9GZS1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1EQ9GZS1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 FAM210CP-201ENST00000445714 574 ntBASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 AC092647.4-201ENST00000457211 535 ntBASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.64■□□□□ 0.57
POLR1EQ9GZS1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 SPDYE15P-201ENST00000424157 909 ntBASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 PVRIG2P-201ENST00000435460 978 ntBASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms