Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PHOX2BQ99453 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHOX2BQ99453 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.58■□□□□ 0.57
PHOX2BQ99453 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHOX2BQ99453 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PHOX2BQ99453 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PHOX2BQ99453 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PHOX2BQ99453 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 AC007967.2-201ENST00000432613 625 ntBASIC18.58■□□□□ 0.56
PHOX2BQ99453 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 AC017007.3-201ENST00000479865 435 ntBASIC18.58■□□□□ 0.56
PHOX2BQ99453 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 GUSBP12-201ENST00000513727 720 ntBASIC18.58■□□□□ 0.56
PHOX2BQ99453 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 SNHG9-202ENST00000564014 471 ntBASIC18.58■□□□□ 0.56
PHOX2BQ99453 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 GPR32P1-201ENST00000601788 811 ntBASIC18.58■□□□□ 0.56
PHOX2BQ99453 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PHOX2BQ99453 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHOX2BQ99453 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC092720.2-201ENST00000602388 1665 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 KRT18P23-201ENST00000435622 1283 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC009533.2-201ENST00000543664 586 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC012640.2-201ENST00000561606 901 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AP001269.4-201ENST00000609611 512 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.57■□□□□ 0.56
PHOX2BQ99453 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHOX2BQ99453 AC099778.1-201ENST00000568593 1911 ntBASIC18.57■□□□□ 0.56
PHOX2BQ99453 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 TREX1-205ENST00000625293 1783 ntBASIC18.56■□□□□ 0.56
PHOX2BQ99453 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 AL023284.2-201ENST00000405850 579 ntBASIC18.56■□□□□ 0.56
PHOX2BQ99453 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 AC007274.1-201ENST00000439805 662 ntBASIC18.56■□□□□ 0.56
PHOX2BQ99453 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 AC002347.1-201ENST00000569543 541 ntBASIC18.56■□□□□ 0.56
PHOX2BQ99453 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
PHOX2BQ99453 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PHOX2BQ99453 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms