Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 AC063952.2-201ENST00000498792 1227 ntBASIC18.97■□□□□ 0.63
IFT43Q96FT9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.97■□□□□ 0.63
IFT43Q96FT9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFT43Q96FT9 AL031598.1-201ENST00000561511 1773 ntBASIC18.96■□□□□ 0.63
IFT43Q96FT9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 MCCD1P1-208ENST00000445732 328 ntBASIC18.96■□□□□ 0.63
IFT43Q96FT9 WWOX-216ENST00000569818 525 ntBASIC18.96■□□□□ 0.63
IFT43Q96FT9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
IFT43Q96FT9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFT43Q96FT9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 AC022616.7-201ENST00000525383 220 ntBASIC18.95■□□□□ 0.62
IFT43Q96FT9 AC087388.1-201ENST00000571370 1112 ntBASIC18.95■□□□□ 0.62
IFT43Q96FT9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IFT43Q96FT9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 GPAT2P1-201ENST00000444924 1672 ntBASIC18.95■□□□□ 0.62
IFT43Q96FT9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IFT43Q96FT9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 AL390961.4-201ENST00000623958 2535 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 RNF152P1-201ENST00000397754 604 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 AL023284.2-201ENST00000405850 579 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 FAM8A6P-201ENST00000407496 1135 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 AC117947.1-201ENST00000427448 529 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IFT43Q96FT9 AP003041.3-201ENST00000527151 707 ntBASIC18.94■□□□□ 0.62
IFT43Q96FT9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.94■□□□□ 0.62
IFT43Q96FT9 AL031432.5-201ENST00000641059 760 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms