Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 KRT16P5-201ENST00000455284 522 ntBASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 AC098590.1-201ENST00000468126 897 ntBASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 RPPH1-201ENST00000516869 333 ntBASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 AL445675.2-201ENST00000620291 557 ntBASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 AP006294.2-201ENST00000641667 209 ntBASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXRED1Q96CU9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 AC134043.2-201ENST00000624206 2238 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 KRASP1-201ENST00000407852 552 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 UBE2SP1-201ENST00000450587 669 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 AC133681.1-201ENST00000465482 601 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 KRT18P41-201ENST00000518924 1277 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 AL359736.2-201ENST00000621992 437 ntBASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
FOXRED1Q96CU9 FLJ13224-201ENST00000313737 1514 ntBASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXRED1Q96CU9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 HTR7P1-201ENST00000538670 1336 ntBASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXRED1Q96CU9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms