Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
APH1AQ96BI3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APH1AQ96BI3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 MIR149-201ENST00000384879 89 ntBASIC16.3■□□□□ 0.2
APH1AQ96BI3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APH1AQ96BI3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
APH1AQ96BI3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
APH1AQ96BI3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AL031133.1-201ENST00000406807 723 ntBASIC16.29■□□□□ 0.2
APH1AQ96BI3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 PVRIG2P-201ENST00000435460 978 ntBASIC16.29■□□□□ 0.2
APH1AQ96BI3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AL136038.4-201ENST00000603606 1261 ntBASIC16.29■□□□□ 0.2
APH1AQ96BI3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
APH1AQ96BI3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APH1AQ96BI3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 AC093503.3-201ENST00000624917 2352 ntBASIC16.28■□□□□ 0.2
APH1AQ96BI3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms