Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
UBE2E3Q969T4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBE2E3Q969T4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBE2E3Q969T4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBE2E3Q969T4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.71■□□□□ 0.42
UBE2E3Q969T4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 AC009947.2-201ENST00000444014 672 ntBASIC17.7■□□□□ 0.42
UBE2E3Q969T4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ABALON-201ENST00000629058 1903 ntBASIC17.7■□□□□ 0.42
UBE2E3Q969T4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2E3Q969T4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 AC073912.3-201ENST00000624414 853 ntBASIC17.69■□□□□ 0.42
UBE2E3Q969T4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2E3Q969T4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 AL354751.1-201ENST00000412768 1863 ntBASIC17.68■□□□□ 0.42
UBE2E3Q969T4 NEFHP1-201ENST00000412845 2629 ntBASIC17.68■□□□□ 0.42
UBE2E3Q969T4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms