Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 Z85996.1-201ENST00000494644 937 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 CR392000.1-201ENST00000624770 1228 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 TMEM191A-211ENST00000637163 1067 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 AL499627.1-201ENST00000569373 2188 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 AC135776.1-201ENST00000319817 2481 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 KRT8P41-201ENST00000533985 1514 ntBASIC15.53■□□□□ 0.08
RTN4IP1Q8WWV3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 AC026271.3-201ENST00000571884 352 ntBASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.52■□□□□ 0.08
RTN4IP1Q8WWV3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RTN4IP1Q8WWV3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 AC134043.2-201ENST00000624206 2238 ntBASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 AL031985.4-201ENST00000642138 673 ntBASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.51■□□□□ 0.07
RTN4IP1Q8WWV3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.5■□□□□ 0.07
RTN4IP1Q8WWV3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms