Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IL1Q8TBN0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 MYC-209ENST00000641252 345 ntBASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IL1Q8TBN0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 AC097658.1-201ENST00000475555 843 ntBASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 AC106820.2-201ENST00000563775 3264 ntBASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IL1Q8TBN0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 AC083906.2-201ENST00000511578 360 ntBASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IL1Q8TBN0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IL1Q8TBN0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms