Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 AC131212.4-201ENST00000623606 975 ntBASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNAAF1Q8NEP3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 POU5F1P3-201ENST00000428824 1078 ntBASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AL353708.3-201ENST00000610272 989 ntBASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 AC068587.9-201ENST00000641814 219 ntBASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DNAAF1Q8NEP3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 NIFKP9-201ENST00000419265 221 ntBASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 PRSS44-201ENST00000515154 1146 ntBASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
DNAAF1Q8NEP3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 LINC00896-202ENST00000609602 2128 ntBASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
DNAAF1Q8NEP3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.2■□□□□ 0.18
DNAAF1Q8NEP3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms