Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.81■□□□□ 0.6
SIX5Q8N196 HNRNPDP1-201ENST00000439535 754 ntBASIC18.81■□□□□ 0.6
SIX5Q8N196 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.81■□□□□ 0.6
SIX5Q8N196 SCARNA2-201ENST00000458748 420 ntBASIC18.81■□□□□ 0.6
SIX5Q8N196 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.81■□□□□ 0.6
SIX5Q8N196 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SIX5Q8N196 KRT89P-201ENST00000620027 1478 ntBASIC18.81■□□□□ 0.6
SIX5Q8N196 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
SIX5Q8N196 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SIX5Q8N196 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIX5Q8N196 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIX5Q8N196 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SIX5Q8N196 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SIX5Q8N196 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.8■□□□□ 0.6
SIX5Q8N196 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.8■□□□□ 0.6
SIX5Q8N196 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SIX5Q8N196 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.8■□□□□ 0.6
SIX5Q8N196 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 PMS2P2-201ENST00000425039 1128 ntBASIC18.8■□□□□ 0.6
SIX5Q8N196 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 AC098831.1-202ENST00000438821 336 ntBASIC18.8■□□□□ 0.6
SIX5Q8N196 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 PGAM5P1-201ENST00000518923 814 ntBASIC18.8■□□□□ 0.6
SIX5Q8N196 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.8■□□□□ 0.6
SIX5Q8N196 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.8■□□□□ 0.6
SIX5Q8N196 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.8■□□□□ 0.6
SIX5Q8N196 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIX5Q8N196 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.8■□□□□ 0.6
SIX5Q8N196 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX5Q8N196 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.79■□□□□ 0.6
SIX5Q8N196 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.79■□□□□ 0.6
SIX5Q8N196 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SIX5Q8N196 FGFR3P6-201ENST00000457012 610 ntBASIC18.79■□□□□ 0.6
SIX5Q8N196 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.79■□□□□ 0.6
SIX5Q8N196 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 MTDHP3-201ENST00000594186 672 ntBASIC18.79■□□□□ 0.6
SIX5Q8N196 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.79■□□□□ 0.6
SIX5Q8N196 AC104109.2-201ENST00000602919 1418 ntBASIC18.79■□□□□ 0.6
SIX5Q8N196 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX5Q8N196 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SIX5Q8N196 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.79■□□□□ 0.6
SIX5Q8N196 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SIX5Q8N196 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIX5Q8N196 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.78■□□□□ 0.6
SIX5Q8N196 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIX5Q8N196 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.78■□□□□ 0.6
SIX5Q8N196 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.78■□□□□ 0.6
SIX5Q8N196 UPF3AP3-201ENST00000420996 769 ntBASIC18.78■□□□□ 0.6
SIX5Q8N196 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.78■□□□□ 0.6
SIX5Q8N196 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.78■□□□□ 0.6
SIX5Q8N196 AC010327.4-202ENST00000591484 748 ntBASIC18.78■□□□□ 0.6
SIX5Q8N196 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 AC140113.2-201ENST00000604370 208 ntBASIC18.78■□□□□ 0.6
SIX5Q8N196 AC027601.4-201ENST00000611259 610 ntBASIC18.78■□□□□ 0.6
SIX5Q8N196 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX5Q8N196 AC099778.1-201ENST00000568593 1911 ntBASIC18.78■□□□□ 0.6
SIX5Q8N196 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms