Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 AC128688.1-201ENST00000487626 519 ntBASIC17.28■□□□□ 0.36
CCDC71Q8IV32 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
CCDC71Q8IV32 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.28■□□□□ 0.36
CCDC71Q8IV32 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC71Q8IV32 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.27■□□□□ 0.36
CCDC71Q8IV32 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 AC004951.3-201ENST00000418645 1148 ntBASIC17.27■□□□□ 0.36
CCDC71Q8IV32 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 FAM87A-204ENST00000613235 858 ntBASIC17.27■□□□□ 0.36
CCDC71Q8IV32 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC71Q8IV32 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC71Q8IV32 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC71Q8IV32 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC71Q8IV32 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCDC71Q8IV32 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC71Q8IV32 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 LINC00896-202ENST00000609602 2128 ntBASIC17.26■□□□□ 0.35
CCDC71Q8IV32 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71Q8IV32 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 MFAP1P1-201ENST00000442257 1255 ntBASIC17.25■□□□□ 0.35
CCDC71Q8IV32 FAM207BP-201ENST00000447172 505 ntBASIC17.25■□□□□ 0.35
CCDC71Q8IV32 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC71Q8IV32 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms