Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 KRT18P6-201ENST00000555540 1265 ntBASIC16.66■□□□□ 0.26
SHFQ7M4L6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 AC124016.1-201ENST00000609552 612 ntBASIC16.66■□□□□ 0.26
SHFQ7M4L6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHFQ7M4L6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHFQ7M4L6 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
SHFQ7M4L6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 ESRRAP1-201ENST00000400596 1257 ntBASIC16.65■□□□□ 0.26
SHFQ7M4L6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHFQ7M4L6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.65■□□□□ 0.26
SHFQ7M4L6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHFQ7M4L6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.64■□□□□ 0.26
SHFQ7M4L6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHFQ7M4L6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 AC112777.1-201ENST00000540175 1423 ntBASIC16.64■□□□□ 0.25
SHFQ7M4L6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 NIFKP9-201ENST00000419265 221 ntBASIC16.64■□□□□ 0.25
SHFQ7M4L6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHFQ7M4L6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.64■□□□□ 0.25
SHFQ7M4L6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms