Protein–RNA interactions for Protein: Q7LGC8

CHST3, Carbohydrate sulfotransferase 3, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3Q7LGC8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHST3Q7LGC8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.07
CHST3Q7LGC8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CHST3Q7LGC8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 AL157888.1-201ENST00000631930 593 ntBASIC21.76■■□□□ 1.07
CHST3Q7LGC8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHST3Q7LGC8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 KRT8P7-201ENST00000533003 1432 ntBASIC21.75■■□□□ 1.07
CHST3Q7LGC8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.75■■□□□ 1.07
CHST3Q7LGC8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 AP000593.1-201ENST00000393668 712 ntBASIC21.75■■□□□ 1.07
CHST3Q7LGC8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHST3Q7LGC8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHST3Q7LGC8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AC135776.1-201ENST00000319817 2481 ntBASIC21.73■■□□□ 1.07
CHST3Q7LGC8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AK4P3-201ENST00000418260 669 ntBASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHST3Q7LGC8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms