Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AC005332.8-201ENST00000622750 2735 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 TSPY5P-201ENST00000426936 936 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AC063952.2-201ENST00000498792 1227 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 KRT18P35-201ENST00000510488 1269 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AC022616.7-201ENST00000525383 220 ntBASIC17.27■□□□□ 0.36
RTL4Q6ZR62 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RTL4Q6ZR62 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RTL4Q6ZR62 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 ARMC10P1-201ENST00000313754 855 ntBASIC17.26■□□□□ 0.35
RTL4Q6ZR62 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 AC092647.4-201ENST00000457211 535 ntBASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 AC011558.1-201ENST00000623459 338 ntBASIC17.26■□□□□ 0.35
RTL4Q6ZR62 AL023973.1-201ENST00000624619 620 ntBASIC17.26■□□□□ 0.35
RTL4Q6ZR62 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.26■□□□□ 0.35
RTL4Q6ZR62 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 MIR3180-5-201ENST00000583743 153 ntBASIC17.25■□□□□ 0.35
RTL4Q6ZR62 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL4Q6ZR62 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms