Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC018445.3-201ENST00000624177 1945 ntBASIC21.82■■□□□ 1.08
CTR9Q6PD62 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC024563.2-201ENST00000603282 481 ntBASIC21.82■■□□□ 1.08
CTR9Q6PD62 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
CTR9Q6PD62 NPAP1P7-201ENST00000613027 823 ntBASIC21.82■■□□□ 1.08
CTR9Q6PD62 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTR9Q6PD62 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 TSPY22P-201ENST00000427496 604 ntBASIC21.81■■□□□ 1.08
CTR9Q6PD62 ATP5G2P1-201ENST00000433580 426 ntBASIC21.81■■□□□ 1.08
CTR9Q6PD62 KRT18P48-201ENST00000434763 852 ntBASIC21.81■■□□□ 1.08
CTR9Q6PD62 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AP003733.1-201ENST00000491725 852 ntBASIC21.81■■□□□ 1.08
CTR9Q6PD62 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 AC005332.3-201ENST00000589904 676 ntBASIC21.81■■□□□ 1.08
CTR9Q6PD62 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTR9Q6PD62 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CTR9Q6PD62 Z83836.1-201ENST00000624605 1642 ntBASIC21.8■■□□□ 1.08
CTR9Q6PD62 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 KRT8P26-201ENST00000534154 1276 ntBASIC21.8■■□□□ 1.08
CTR9Q6PD62 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 AL121672.3-201ENST00000608644 468 ntBASIC21.8■■□□□ 1.08
CTR9Q6PD62 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTR9Q6PD62 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.8■■□□□ 1.08
CTR9Q6PD62 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTR9Q6PD62 BX323043.1-201ENST00000641006 1765 ntBASIC21.79■■□□□ 1.08
CTR9Q6PD62 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTR9Q6PD62 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTR9Q6PD62 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 AP002383.4-201ENST00000442518 975 ntBASIC21.79■■□□□ 1.08
CTR9Q6PD62 TSSC2-201ENST00000450217 709 ntBASIC21.79■■□□□ 1.08
CTR9Q6PD62 BX276092.5-203ENST00000456199 560 ntBASIC21.79■■□□□ 1.08
CTR9Q6PD62 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 AL390719.2-201ENST00000606993 987 ntBASIC21.79■■□□□ 1.08
CTR9Q6PD62 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CTR9Q6PD62 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CTR9Q6PD62 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTR9Q6PD62 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms