Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 AC104692.2-201ENST00000603054 253 ntBASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 LINC00167-201ENST00000530583 1419 ntBASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 AC091607.1-201ENST00000490318 1060 ntBASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 Z69720.1-201ENST00000601483 472 ntBASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC62Q6P9F0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 AL353801.3-201ENST00000609898 542 ntBASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 AC004263.2-201ENST00000617183 678 ntBASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC62Q6P9F0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CCDC62Q6P9F0 KRT8P10-201ENST00000450021 1447 ntBASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 MIR149-201ENST00000384879 89 ntBASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 AL031008.1-201ENST00000619963 541 ntBASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC62Q6P9F0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 AC099336.1-202ENST00000602961 463 ntBASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 AC138894.3-201ENST00000603787 634 ntBASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC62Q6P9F0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms