Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 MMP23A-201ENST00000234610 1017 ntBASIC16.78■□□□□ 0.28
NIPAL3Q6P499 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 KRT8P3-201ENST00000519669 1449 ntBASIC16.78■□□□□ 0.28
NIPAL3Q6P499 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NIPAL3Q6P499 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.77■□□□□ 0.28
NIPAL3Q6P499 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 BX088651.1-201ENST00000540551 451 ntBASIC16.77■□□□□ 0.28
NIPAL3Q6P499 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 C2orf69P3-201ENST00000565542 1120 ntBASIC16.77■□□□□ 0.28
NIPAL3Q6P499 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NIPAL3Q6P499 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 AC135776.1-201ENST00000319817 2481 ntBASIC16.77■□□□□ 0.27
NIPAL3Q6P499 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.77■□□□□ 0.27
NIPAL3Q6P499 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 LTB4R2-202ENST00000528054 3092 ntBASIC16.76■□□□□ 0.27
NIPAL3Q6P499 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NIPAL3Q6P499 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms