Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 KRT8P50-201ENST00000562022 1438 ntBASIC17.81■□□□□ 0.44
HIST2H2AA3Q6FI13 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 LINC01568-207ENST00000641790 1380 ntBASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 KRT18P22-201ENST00000402024 1347 ntBASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST2H2AA3Q6FI13 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 AL162741.1-201ENST00000565563 1558 ntBASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 INGX-201ENST00000359239 846 ntBASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 ECEL1P2-202ENST00000465689 757 ntBASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 AC112497.1-201ENST00000624824 639 ntBASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HIST2H2AA3Q6FI13 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST2H2AA3Q6FI13 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms