Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 AL109659.2-201ENST00000606809 1674 ntBASIC19.31■□□□□ 0.68
RNF43Q68DV7 KRT8P32-201ENST00000512863 1461 ntBASIC19.31■□□□□ 0.68
RNF43Q68DV7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 AC068880.1-201ENST00000507289 2297 ntBASIC19.31■□□□□ 0.68
RNF43Q68DV7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF43Q68DV7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF43Q68DV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.3■□□□□ 0.68
RNF43Q68DV7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 MCCD1P1-208ENST00000445732 328 ntBASIC19.3■□□□□ 0.68
RNF43Q68DV7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 MIR3180-5-201ENST00000583743 153 ntBASIC19.3■□□□□ 0.68
RNF43Q68DV7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.3■□□□□ 0.68
RNF43Q68DV7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 AC093525.10-201ENST00000625130 1569 ntBASIC19.3■□□□□ 0.68
RNF43Q68DV7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF43Q68DV7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF43Q68DV7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF43Q68DV7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF43Q68DV7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms