Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC38Q5VT99 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 MIR4497-201ENST00000583208 89 ntBASIC19.12■□□□□ 0.65
LRRC38Q5VT99 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC38Q5VT99 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC38Q5VT99 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 AC093010.1-201ENST00000473625 1624 ntBASIC19.1■□□□□ 0.65
LRRC38Q5VT99 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC38Q5VT99 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms