Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 IGHV3-42-201ENST00000520410 361 ntBASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 AC010507.1-201ENST00000633895 436 ntBASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.58■□□□□ 0.88
COL13A1Q5TAT6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AC004817.3-201ENST00000602957 2129 ntBASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 FAM86MP-201ENST00000340703 885 ntBASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AC092552.1-201ENST00000547243 906 ntBASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 AC025580.3-201ENST00000617932 1424 ntBASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.57■□□□□ 0.88
COL13A1Q5TAT6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 ACA64.2-201ENST00000459014 129 ntBASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 MIR6727-201ENST00000620702 65 ntBASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 AL033527.4-201ENST00000641026 673 ntBASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
COL13A1Q5TAT6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 GPR182-203ENST00000622922 591 ntBASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 FP700111.2-201ENST00000619190 1892 ntBASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms