Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.03■□□□□ 0.96
SREBF2Q12772 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SREBF2Q12772 AC254562.1-201ENST00000417586 456 ntBASIC21.03■□□□□ 0.96
SREBF2Q12772 FAM8A3P-201ENST00000427218 844 ntBASIC21.03■□□□□ 0.96
SREBF2Q12772 YBX1P5-201ENST00000509441 847 ntBASIC21.03■□□□□ 0.96
SREBF2Q12772 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SREBF2Q12772 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SREBF2Q12772 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.03■□□□□ 0.96
SREBF2Q12772 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.02■□□□□ 0.96
SREBF2Q12772 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.02■□□□□ 0.96
SREBF2Q12772 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.02■□□□□ 0.96
SREBF2Q12772 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SREBF2Q12772 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.02■□□□□ 0.96
SREBF2Q12772 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.02■□□□□ 0.96
SREBF2Q12772 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.02■□□□□ 0.96
SREBF2Q12772 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.02■□□□□ 0.96
SREBF2Q12772 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
SREBF2Q12772 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.02■□□□□ 0.96
SREBF2Q12772 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.02■□□□□ 0.96
SREBF2Q12772 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.02■□□□□ 0.96
SREBF2Q12772 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.02■□□□□ 0.96
SREBF2Q12772 PGM5P2-202ENST00000637225 1043 ntBASIC21.02■□□□□ 0.96
SREBF2Q12772 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.02■□□□□ 0.96
SREBF2Q12772 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SREBF2Q12772 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SREBF2Q12772 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.02■□□□□ 0.95
SREBF2Q12772 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SREBF2Q12772 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
SREBF2Q12772 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.01■□□□□ 0.95
SREBF2Q12772 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.01■□□□□ 0.95
SREBF2Q12772 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.01■□□□□ 0.95
SREBF2Q12772 AC005593.1-201ENST00000624894 515 ntBASIC21.01■□□□□ 0.95
SREBF2Q12772 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SREBF2Q12772 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SREBF2Q12772 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SREBF2Q12772 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21■□□□□ 0.95
SREBF2Q12772 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SREBF2Q12772 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SREBF2Q12772 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21■□□□□ 0.95
SREBF2Q12772 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21■□□□□ 0.95
SREBF2Q12772 AL645939.2-201ENST00000427340 991 ntBASIC21■□□□□ 0.95
SREBF2Q12772 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21■□□□□ 0.95
SREBF2Q12772 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21■□□□□ 0.95
SREBF2Q12772 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 AC009102.3-201ENST00000623118 1491 ntBASIC21■□□□□ 0.95
SREBF2Q12772 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SREBF2Q12772 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SREBF2Q12772 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
SREBF2Q12772 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
SREBF2Q12772 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.99■□□□□ 0.95
SREBF2Q12772 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.99■□□□□ 0.95
SREBF2Q12772 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.99■□□□□ 0.95
SREBF2Q12772 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SREBF2Q12772 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms