Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH1Q08174 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDH1Q08174 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 NOC2LP1-202ENST00000452600 2235 ntBASIC17.75■□□□□ 0.43
PCDH1Q08174 AC135776.1-201ENST00000319817 2481 ntBASIC17.75■□□□□ 0.43
PCDH1Q08174 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.75■□□□□ 0.43
PCDH1Q08174 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH1Q08174 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH1Q08174 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH1Q08174 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDH1Q08174 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH1Q08174 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 GMCL1P1-201ENST00000463439 1581 ntBASIC17.74■□□□□ 0.43
PCDH1Q08174 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH1Q08174 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 ESPNP-201ENST00000270691 2015 ntBASIC17.74■□□□□ 0.43
PCDH1Q08174 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDH1Q08174 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH1Q08174 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDH1Q08174 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDH1Q08174 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDH1Q08174 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDH1Q08174 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDH1Q08174 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
PCDH1Q08174 KRT18P22-201ENST00000402024 1347 ntBASIC17.73■□□□□ 0.43
PCDH1Q08174 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDH1Q08174 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDH1Q08174 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms