Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NKX6-1P78426 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NKX6-1P78426 AP000974.1-201ENST00000623909 2387 ntBASIC16.22■□□□□ 0.19
NKX6-1P78426 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX6-1P78426 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX6-1P78426 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.22■□□□□ 0.19
NKX6-1P78426 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.22■□□□□ 0.19
NKX6-1P78426 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-1P78426 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX6-1P78426 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-1P78426 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX6-1P78426 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX6-1P78426 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NKX6-1P78426 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.22■□□□□ 0.19
NKX6-1P78426 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX6-1P78426 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NKX6-1P78426 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX6-1P78426 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
NKX6-1P78426 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NKX6-1P78426 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NKX6-1P78426 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 PRELID1P1-202ENST00000567272 903 ntBASIC16.21■□□□□ 0.19
NKX6-1P78426 MIR3652-201ENST00000579335 131 ntBASIC16.21■□□□□ 0.19
NKX6-1P78426 NEK4P2-201ENST00000580004 1012 ntBASIC16.21■□□□□ 0.19
NKX6-1P78426 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX6-1P78426 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NKX6-1P78426 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NKX6-1P78426 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX6-1P78426 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 AC116562.4-201ENST00000641316 2276 ntBASIC16.21■□□□□ 0.19
NKX6-1P78426 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX6-1P78426 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-1P78426 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-1P78426 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-1P78426 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NKX6-1P78426 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 AL512353.2-201ENST00000448759 1962 ntBASIC16.2■□□□□ 0.18
NKX6-1P78426 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.2■□□□□ 0.18
NKX6-1P78426 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX6-1P78426 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX6-1P78426 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms