Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
TPM4P67936 AC008556.1-201ENST00000610908 2040 ntBASIC20.66■□□□□ 0.9
TPM4P67936 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 REXO1L9P-201ENST00000604264 2108 ntBASIC20.65■□□□□ 0.9
TPM4P67936 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.65■□□□□ 0.9
TPM4P67936 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TPM4P67936 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TPM4P67936 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TPM4P67936 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TPM4P67936 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
TPM4P67936 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TPM4P67936 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPM4P67936 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TPM4P67936 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.64■□□□□ 0.9
TPM4P67936 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.64■□□□□ 0.9
TPM4P67936 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TPM4P67936 MYLKP1-201ENST00000509077 1580 ntBASIC20.64■□□□□ 0.9
TPM4P67936 FLJ13224-201ENST00000313737 1514 ntBASIC20.64■□□□□ 0.9
TPM4P67936 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TPM4P67936 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TPM4P67936 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM4P67936 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TPM4P67936 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TPM4P67936 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM4P67936 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.64■□□□□ 0.89
TPM4P67936 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TPM4P67936 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TPM4P67936 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.63■□□□□ 0.89
TPM4P67936 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TPM4P67936 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.63■□□□□ 0.89
TPM4P67936 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM4P67936 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.63■□□□□ 0.89
TPM4P67936 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.63■□□□□ 0.89
TPM4P67936 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TPM4P67936 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TPM4P67936 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TPM4P67936 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.63■□□□□ 0.89
TPM4P67936 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TPM4P67936 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 FER1L4-210ENST00000615531 5998 ntBASIC20.62■□□□□ 0.89
TPM4P67936 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TPM4P67936 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM4P67936 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.62■□□□□ 0.89
TPM4P67936 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM4P67936 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.62■□□□□ 0.89
TPM4P67936 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.62■□□□□ 0.89
TPM4P67936 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms