Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RPS3AP61247 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
RPS3AP61247 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.27■□□□□ 0.36
RPS3AP61247 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.27■□□□□ 0.36
RPS3AP61247 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RPS3AP61247 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 MESTP1-201ENST00000404287 994 ntBASIC17.27■□□□□ 0.36
RPS3AP61247 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPS3AP61247 TSPY15P-201ENST00000457163 923 ntBASIC17.27■□□□□ 0.36
RPS3AP61247 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.27■□□□□ 0.36
RPS3AP61247 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
RPS3AP61247 SLC25A1P4-201ENST00000567977 778 ntBASIC17.27■□□□□ 0.36
RPS3AP61247 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.27■□□□□ 0.36
RPS3AP61247 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPS3AP61247 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RPS3AP61247 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
RPS3AP61247 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.27■□□□□ 0.35
RPS3AP61247 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RPS3AP61247 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPS3AP61247 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 CRYGFP-201ENST00000418459 633 ntBASIC17.26■□□□□ 0.35
RPS3AP61247 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.26■□□□□ 0.35
RPS3AP61247 AC091390.4-202ENST00000476426 537 ntBASIC17.26■□□□□ 0.35
RPS3AP61247 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 FITM1-202ENST00000559294 800 ntBASIC17.26■□□□□ 0.35
RPS3AP61247 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPS3AP61247 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.26■□□□□ 0.35
RPS3AP61247 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPS3AP61247 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPS3AP61247 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.25■□□□□ 0.35
RPS3AP61247 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS3AP61247 AC093525.10-201ENST00000625130 1569 ntBASIC17.25■□□□□ 0.35
RPS3AP61247 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPS3AP61247 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPS3AP61247 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPS3AP61247 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS3AP61247 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPS3AP61247 AC087499.1-201ENST00000418141 1075 ntBASIC17.25■□□□□ 0.35
RPS3AP61247 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS3AP61247 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.25■□□□□ 0.35
RPS3AP61247 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.25■□□□□ 0.35
RPS3AP61247 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS3AP61247 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.25■□□□□ 0.35
RPS3AP61247 AP005242.2-201ENST00000580065 1175 ntBASIC17.25■□□□□ 0.35
RPS3AP61247 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RPS3AP61247 LINC01023-201ENST00000606054 436 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms