Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN12P56749 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN12P56749 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN12P56749 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN12P56749 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN12P56749 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN12P56749 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 KRT8P11-201ENST00000409686 1436 ntBASIC16.03■□□□□ 0.16
CLDN12P56749 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN12P56749 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN12P56749 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLDN12P56749 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN12P56749 POU5F1P3-201ENST00000428824 1078 ntBASIC16.03■□□□□ 0.16
CLDN12P56749 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN12P56749 PRKY-204ENST00000533551 1019 ntBASIC16.03■□□□□ 0.16
CLDN12P56749 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 AC098934.4-201ENST00000564127 592 ntBASIC16.03■□□□□ 0.16
CLDN12P56749 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN12P56749 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN12P56749 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN12P56749 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN12P56749 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN12P56749 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN12P56749 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 TSPY6P-201ENST00000448518 926 ntBASIC16.02■□□□□ 0.16
CLDN12P56749 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN12P56749 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 Z85996.1-201ENST00000494644 937 ntBASIC16.02■□□□□ 0.16
CLDN12P56749 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.02■□□□□ 0.16
CLDN12P56749 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN12P56749 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN12P56749 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CLDN12P56749 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN12P56749 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN12P56749 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN12P56749 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CLDN12P56749 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN12P56749 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN12P56749 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN12P56749 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN12P56749 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN12P56749 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CLDN12P56749 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN12P56749 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN12P56749 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms