Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC092329.2-201ENST00000598402 547 ntBASIC17.04■□□□□ 0.32
PER3P56645 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.04■□□□□ 0.32
PER3P56645 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.04■□□□□ 0.32
PER3P56645 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PER3P56645 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PER3P56645 AC093484.2-201ENST00000580996 2166 ntBASIC17.04■□□□□ 0.32
PER3P56645 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.03■□□□□ 0.32
PER3P56645 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
PER3P56645 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PER3P56645 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PER3P56645 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.03■□□□□ 0.32
PER3P56645 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PER3P56645 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.03■□□□□ 0.32
PER3P56645 RN7SL510P-201ENST00000581311 263 ntBASIC17.03■□□□□ 0.32
PER3P56645 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PER3P56645 AC018470.1-201ENST00000624790 3129 ntBASIC17.03■□□□□ 0.32
PER3P56645 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PER3P56645 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PER3P56645 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PER3P56645 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PER3P56645 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.03■□□□□ 0.32
PER3P56645 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PER3P56645 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PER3P56645 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.02■□□□□ 0.32
PER3P56645 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.02■□□□□ 0.32
PER3P56645 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
PER3P56645 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PER3P56645 AC092119.3-201ENST00000612618 583 ntBASIC17.02■□□□□ 0.32
PER3P56645 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PER3P56645 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PER3P56645 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
PER3P56645 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
PER3P56645 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.02■□□□□ 0.31
PER3P56645 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PER3P56645 ZNF815P-204ENST00000434898 1737 ntBASIC17.01■□□□□ 0.31
PER3P56645 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.01■□□□□ 0.31
PER3P56645 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 AL645929.1-201ENST00000420084 975 ntBASIC17.01■□□□□ 0.31
PER3P56645 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 GCSHP2-201ENST00000560971 527 ntBASIC17.01■□□□□ 0.31
PER3P56645 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.01■□□□□ 0.31
PER3P56645 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PER3P56645 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PER3P56645 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms