Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 AC141586.3-201ENST00000562166 1838 ntBASIC18.07■□□□□ 0.48
GTF2A1P52655 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GTF2A1P52655 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 AL136116.3-201ENST00000402907 1138 ntBASIC18.07■□□□□ 0.48
GTF2A1P52655 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
GTF2A1P52655 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
GTF2A1P52655 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
GTF2A1P52655 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.07■□□□□ 0.48
GTF2A1P52655 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.07■□□□□ 0.48
GTF2A1P52655 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
GTF2A1P52655 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GTF2A1P52655 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 TSPY26P-201ENST00000476365 1326 ntBASIC18.06■□□□□ 0.48
GTF2A1P52655 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.06■□□□□ 0.48
GTF2A1P52655 AC008764.7-201ENST00000593779 1081 ntBASIC18.06■□□□□ 0.48
GTF2A1P52655 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 LINC00602-201ENST00000629776 2065 ntBASIC18.06■□□□□ 0.48
GTF2A1P52655 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
GTF2A1P52655 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GTF2A1P52655 DPP3P2-201ENST00000416030 1696 ntBASIC18.06■□□□□ 0.48
GTF2A1P52655 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GTF2A1P52655 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.06■□□□□ 0.48
GTF2A1P52655 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.05■□□□□ 0.48
GTF2A1P52655 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.05■□□□□ 0.48
GTF2A1P52655 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.05■□□□□ 0.48
GTF2A1P52655 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.05■□□□□ 0.48
GTF2A1P52655 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GTF2A1P52655 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GTF2A1P52655 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
GTF2A1P52655 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GTF2A1P52655 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GTF2A1P52655 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms