Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.09■□□□□ 0.17
GSK3AP49840 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.09■□□□□ 0.17
GSK3AP49840 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 KRT8P45-201ENST00000414328 1447 ntBASIC16.09■□□□□ 0.17
GSK3AP49840 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GSK3AP49840 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GSK3AP49840 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
GSK3AP49840 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.09■□□□□ 0.17
GSK3AP49840 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
GSK3AP49840 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GSK3AP49840 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.09■□□□□ 0.17
GSK3AP49840 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
GSK3AP49840 GPAT2P1-201ENST00000444924 1672 ntBASIC16.08■□□□□ 0.17
GSK3AP49840 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
GSK3AP49840 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
GSK3AP49840 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
GSK3AP49840 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
GSK3AP49840 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GSK3AP49840 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GSK3AP49840 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 SLC25A6P5-201ENST00000435663 894 ntBASIC16.08■□□□□ 0.16
GSK3AP49840 MCCD1P1-208ENST00000445732 328 ntBASIC16.08■□□□□ 0.16
GSK3AP49840 RBM17P1-201ENST00000453646 1190 ntBASIC16.08■□□□□ 0.16
GSK3AP49840 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.08■□□□□ 0.16
GSK3AP49840 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.08■□□□□ 0.16
GSK3AP49840 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.08■□□□□ 0.16
GSK3AP49840 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.08■□□□□ 0.16
GSK3AP49840 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
GSK3AP49840 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.08■□□□□ 0.16
GSK3AP49840 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.08■□□□□ 0.16
GSK3AP49840 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
GSK3AP49840 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.08■□□□□ 0.16
GSK3AP49840 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GSK3AP49840 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
GSK3AP49840 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.07■□□□□ 0.16
GSK3AP49840 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GSK3AP49840 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
GSK3AP49840 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.07■□□□□ 0.16
GSK3AP49840 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GSK3AP49840 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GSK3AP49840 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.07■□□□□ 0.16
GSK3AP49840 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 AC008764.6-201ENST00000595909 2069 ntBASIC16.07■□□□□ 0.16
GSK3AP49840 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GSK3AP49840 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GSK3AP49840 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
GSK3AP49840 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GSK3AP49840 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.06■□□□□ 0.16
GSK3AP49840 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GSK3AP49840 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GSK3AP49840 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 MIR564-202ENST00000385049 94 ntBASIC16.06■□□□□ 0.16
GSK3AP49840 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.06■□□□□ 0.16
GSK3AP49840 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GSK3AP49840 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms